5.4.6. Workflow Documentation

Clearly document the steps taken in the analysis to allow others to understand and replicate the process.

How?

• Document the execution workflow in an automation script. E.g., with a simple run_analysis.sh, a workflow management tool like snakemake or nextflow, or GitHub Actions .

• Clarify how the version of the analysis scripts, as well as, the dataset are linked to the execution of the analysis.

• Specify how the execution environment is build up.